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The smokers dataset contains microbiome data from left and right throat samples of 290 subjects, along with taxonomy and metadata tables.

Format

A list containing:

otu

OTU table, 2156 taxa by 290 samples

tax

Taxonomy table, 2156 taxa by 7 taxonomic ranks

meta

Metadata table, 290 samples by 53 variables

genus

304 genera by 290 samples

family

113 families by 290 samples

Source

Charlson ES, Chen J, Custers-Allen R, Bittinger K, Li H, et al. (2010) Disordered Microbial Communities in the Upper Respiratory Tract of Cigarette Smokers. PLoS ONE 5(12): e15216. https://qiita.ucsd.edu/study/description/524

References

Charlson ES, et al. PLoS ONE 2010